Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lrig2Leucine-rich repeats and immunoglobulin-like domains 2. (1061 aa)    
Predicted Functional Partners:
ENSACLP00000035046
RGM domain family, member D.
     
 0.902
LOC113032360
Hemojuvelin BMP co-receptor.
     
 0.883
rgmb
Repulsive guidance molecule BMP co-receptor b.
     
 0.880
rgma
Repulsive guidance molecule BMP co-receptor a.
     
 0.880
ENSACLP00000006413
DCC netrin 1 receptor.
   
 0.854
ENSACLP00000019899
Neogenin 1b.
   
 0.854
lrig1
Leucine-rich repeats and immunoglobulin-like domains 1.
   
   0.845
met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.781
LOC113022284
Macrophage stimulating 1 receptor a.
    
 0.781
mst1r
Macrophage stimulating 1 receptor b.
    
 0.781
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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