Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000001630Uncharacterized protein. (60 aa)    
Predicted Functional Partners:
hspd1
Heat shock 60 protein 1; Belongs to the chaperonin (HSP60) family.
  
 0.986
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
   
 0.981
stip1
Stress-induced phosphoprotein 1.
  
 0.981
sugt1
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
   
 0.976
ENSACLP00000010086
Heat shock protein 4b.
  
 0.971
LOC113030435
Heat shock protein 4a.
  
 0.971
ptges3
Prostaglandin E synthase 3a (cytosolic).
   
 0.967
CDC37
Cell division cycle 37 homolog (S. cerevisiae).
    
 0.956
ENSACLP00000032233
Cell division cycle 37-like 1.
    
 0.956
nos1
Nitric oxide synthase; Produces nitric oxide (NO).
    
 0.952
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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