STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000001655SRY-box transcription factor 1a. (344 aa)    
Predicted Functional Partners:
LOC113025878
POU domain protein.
    
 0.939
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.846
sall4
Spalt-like transcription factor 4.
   
 0.834
ENSACLP00000037567
PR domain containing 14.
    
 0.676
LIN28A
Lin-28 homolog A.
    
 0.651
LOC113021093
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.625
ube2i
Ubiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.625
fgf8
Fibroblast growth factor; Belongs to the heparin-binding growth factors family.
     
 0.621
ENSACLP00000025979
Myelin expression factor 2.
    
   0.613
LOC113033212
Nuclear receptor subfamily 5, group A, member 1a.
    
 0.609
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (24%) [HD]