Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000001657Transmembrane channel-like protein. (1086 aa)    
Predicted Functional Partners:
ENSACLP00000015454
Calcium and integrin binding family member 3.
    
 0.793
LOC113026762
Calcium and integrin binding family member 2.
    
 0.793
CIB2
Calcium and integrin binding family member 2.
    
 0.793
ENSACLP00000041315
Calcium and integrin binding 1 (calmyrin).
    
 0.793
tmie
Transmembrane inner ear.
     
 0.769
ano6
Anoctamin.
      
 0.665
ENSACLP00000034761
Serine/arginine repetitive matrix 4.
    
 0.651
rpgrip1l
RPGRIP1 like.
     
 0.642
ext2
Exostosin glycosyltransferase 2; Belongs to the glycosyltransferase 47 family.
     
  0.642
stox1
Storkhead box 1.
      
 0.607
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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