STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000001657Transmembrane channel-like protein. (1086 aa)    
Predicted Functional Partners:
ENSACLP00000015454
Calcium and integrin binding family member 3.
    
 0.824
LOC113026762
Calcium and integrin binding family member 2.
    
 0.824
CIB2
Calcium and integrin binding family member 2.
    
 0.824
ENSACLP00000041315
Calcium and integrin binding 1 (calmyrin).
    
 0.824
LOC113022754
Tankyrase_bdg_C domain-containing protein.
   
  0.612
ripk4
Receptor-interacting serine-threonine kinase 4.
   
  0.591
met
MET proto-oncogene, receptor tyrosine kinase.
    
  0.586
LOC113022284
Macrophage stimulating 1 receptor a.
    
  0.586
mst1r
Macrophage stimulating 1 receptor b.
    
  0.586
ENSACLP00000037094
Im:7152348.
   
  0.583
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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