Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113014086Homeobox domain-containing protein. (358 aa)    
Predicted Functional Partners:
rchy1
Ring finger and CHY zinc finger domain containing 1.
    
 
 0.696
LOC113021319
Homeobox domain-containing protein.
   
 
 0.694
ENSACLP00000035265
Homeobox B5b.
   
 
 0.694
hoxd10
Homeobox D10a.
   
 
 0.671
hoxa5
Homeobox A5a.
   
 
 0.666
snai2
Snail family zinc finger 2.
      
 0.623
LOC113013761
Homeobox C10a.
   
 
 0.599
fosl2
Fos-like antigen 2.
    
 
 0.502
pgs1
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Functions in the biosynthesis of the anionic phospholipids phosphatidylglycerol and cardiolipin; Belongs to the CDP-alcohol phosphatidyltransferase class-II family.
      
 0.500
LOC113021323
Homeobox B4a.
   
 
 0.491
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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