Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nfkbidANK_REP_REGION domain-containing protein. (503 aa)    
Predicted Functional Partners:
ENSACLP00000005014
Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100).
   
 
 0.846
nfkb1
Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1.
   
 
 0.846
ENSACLP00000017756
V-rel avian reticuloendotheliosis viral oncogene homolog A.
   
 0.826
rel
V-rel avian reticuloendotheliosis viral oncogene homolog.
   
 0.826
relb
V-rel avian reticuloendotheliosis viral oncogene homolog B.
   
 0.826
ss18
SS18 subunit of BAF chromatin remodeling complex.
    
   0.805
ENSACLP00000009518
Succinate dehydrogenase complex assembly factor 1; Belongs to the complex I LYR family.
      
 0.753
hlcs
Holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase).
     
 0.736
ENSACLP00000020883
N-lysine methyltransferase SETD6; Protein-lysine N-methyltransferase. Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SETD6 subfamily.
    
 0.734
pnisr
PNN-interacting serine/arginine-rich protein.
    
 
 0.688
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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