STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000001662Uncharacterized protein. (282 aa)    
Predicted Functional Partners:
TMEM43
Uncharacterized protein.
    
 
 0.778
MSL3
MSL complex subunit 3.
    
 0.689
maml1
Mastermind-like transcriptional coactivator 1.
    
 0.578
LOC113012217
MSL complex subunit 2.
    
 0.571
MSL2
MSL complex subunit 2.
    
 0.571
LOC113015367
Protein S100; Belongs to the S-100 family.
    
  0.564
maml3
Mastermind-like transcriptional coactivator 3.
    
 0.556
mysm1
Myb-like, SWIRM and MPN domains 1.
    
  0.544
maml2
MamL-1 domain-containing protein.
    
 0.536
NCSTN
Nicastrin.
    
 0.530
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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