STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000001671Afadin, adherens junction formation factor a. (1571 aa)    
Predicted Functional Partners:
nectin1
Nectin cell adhesion molecule 1b.
    
 0.982
ENSACLP00000003449
Catenin (cadherin-associated protein), alpha 1.
   
 0.973
ctnna2
Catenin (cadherin-associated protein), alpha 2.
   
 0.973
LOC113036070
Uncharacterized protein.
    
 0.972
LOC113030735
Nectin cell adhesion molecule 3b.
    
 0.972
LOC113008802
Uncharacterized protein.
    
 0.972
LOC113021951
Uncharacterized protein.
    
 0.972
ENSACLP00000013773
Tight junction protein 1b; Belongs to the MAGUK family.
   
 0.970
LOC113021929
Tight junction protein 1a; Belongs to the MAGUK family.
   
 0.970
LOC113035484
Uncharacterized protein.
   
 0.967
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.