Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000001678Calpain 3a, (p94); Belongs to the peptidase C2 family. (714 aa)    
Predicted Functional Partners:
ENSACLP00000018503
Calpastatin.
    
 0.898
LOC113030738
Calpain, small subunit 1 b.
   
 0.781
CAPNS1
Calpain small subunit 1.
   
 0.781
LOC113029596
Zgc:153993.
   
 
 0.728
ENSACLP00000012284
Uncharacterized protein.
     
  0.720
bax
Uncharacterized protein.
     
 0.606
ENSACLP00000006475
Uncharacterized protein.
     
 0.606
LOC113021474
Uncharacterized protein.
     
 0.597
LOC113021474-2
Apoptosis regulator BAX-like.
     
 0.597
LOC113014961
Cyclin-dependent kinase 5 activator.
    
  0.519
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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