STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hoxa5Homeobox A5a. (281 aa)    
Predicted Functional Partners:
hoxa3
Homeobox A4a.
   
  
0.817
ENSACLP00000035301
Homeobox domain-containing protein.
   
  
0.816
LOC113021319
Homeobox domain-containing protein.
  
   
0.602
ENSACLP00000035265
Homeobox B5b.
  
   
0.596
LOC113021323
Homeobox B4a.
  
 
0.578
nfatc2
Nuclear factor of activated T cells 2a.
      
 0.577
HOXA7
Homeobox A7.
   
   
0.563
LOC113014086
Homeobox domain-containing protein.
  
  
0.508
LOC113032017
Homeobox A2b.
  
  
0.501
LOC113031962
Pre-B-cell leukemia homeobox 2.
    
 0.494
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.