STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000001684Uncharacterized protein. (280 aa)    
Predicted Functional Partners:
bag3
BCL2 associated athanogene 3.
    
 
 0.700
RPS27A
Ribosomal protein S27a.
    
  0.665
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.626
ube2w
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.603
LOC113015873
Runt-related transcription factor.
    
  0.587
runx3
Runt-related transcription factor.
    
  0.587
runx2
Runt-related transcription factor.
    
  0.587
LOC113035412
Runt domain-containing protein.
    
  0.587
ENSACLP00000018312
Baculoviral IAP repeat containing 6.
    
 0.573
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
    
 0.569
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.