Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000001684Uncharacterized protein. (280 aa)    
Predicted Functional Partners:
vim
Vimentin like; Belongs to the intermediate filament family.
    
  0.894
LOC113007020
Notochord granular surface; Belongs to the intermediate filament family.
    
  0.843
des
Desmin b; Belongs to the intermediate filament family.
    
  0.843
LOC113007483
Desmin a; Belongs to the intermediate filament family.
    
  0.843
bag3
BCL2 associated athanogene 3.
    
 
 0.792
LOC113020337
Glial fibrillary acidic protein; Belongs to the intermediate filament family.
    
  0.769
ube2w
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.667
prkn
E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.
    
 
 0.647
bag2
BCL2 associated athanogene 2.
    
 
 0.624
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.604
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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