STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000001718C2H2-type domain-containing protein. (1363 aa)    
Predicted Functional Partners:
ENSACLP00000036881
CREB binding protein a.
    
  0.854
LOC113020749
CREB binding protein b.
    
  0.854
zdhhc22
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
    
 
 0.737
brix1
Brix domain containing 2.
      
 0.720
trap1
TNF receptor-associated protein 1.
    
 0.718
coq6
Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial; FAD-dependent monooxygenase required for the C5-ring hydroxylation during ubiquinone biosynthesis. Catalyzes the hydroxylation of 3-polyprenyl-4-hydroxybenzoic acid to 3-polyprenyl- 4,5-dihydroxybenzoic acid. The electrons required for the hydroxylation reaction may be funneled indirectly from NADPH via a ferredoxin/ferredoxin reductase system to COQ6.
      
 0.708
ENSACLP00000025762
Ribosomal L1 domain containing 1.
    
 
 0.689
ENSACLP00000010086
Heat shock protein 4b.
   
   0.682
LOC113030435
Heat shock protein 4a.
   
   0.682
ENSACLP00000036883
NOP58 ribonucleoprotein homolog (yeast).
    
 
 0.675
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: medium (44%) [HD]