Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC113027041Zgc:123278. (192 aa)    
Predicted Functional Partners:
vps28
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
 0.997
hgs
Hepatocyte growth factor-regulated tyrosine kinase substrate.
    
 0.994
vps37a
VPS37A subunit of ESCRT-I.
   
 0.993
vps37b
VPS37B subunit of ESCRT-I.
   
 0.992
LOC113024825
VPS37C subunit of ESCRT-I.
    
 0.991
vps25
Vacuolar protein sorting 25 homolog.
   
 0.987
vps36
Vacuolar protein sorting 36 homolog.
    
 0.986
mvb12a
Uncharacterized protein.
    
 0.986
snf8
Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.
    
 0.984
stam
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
   
 0.980
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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