STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NRCAMNeuronal cell adhesion molecule. (1297 aa)    
Predicted Functional Partners:
CNTN1
Contactin 1.
   
 0.921
cntn1
Contactin 1b.
   
 0.921
cntn2
Contactin 2.
   
 0.899
nrp1
Neuropilin; Belongs to the neuropilin family.
    
 0.868
cntn5
Contactin 5.
   
 0.726
LOC113022950
Contactin 3b.
   
 0.726
LOC113022959
Uncharacterized protein.
   
 0.726
LOC113022960
Contactin 4.
   
 0.726
LOC113012799
Contactin 3a, tandem duplicate 1.
   
 0.726
LOC113013106
Contactin 3a, tandem duplicate 2.
   
 0.726
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.