Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC113011147TRIF-NTD domain-containing protein. (550 aa)    
Predicted Functional Partners:
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.984
LOC113024716
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.982
traf3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.982
ripk1
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
    
 0.963
tmed2
Transmembrane p24 trafficking protein 2.
   
 0.959
tmed10
Transmembrane p24 trafficking protein 10.
   
 0.955
LOC113024405
Toll-like receptor 3; Belongs to the Toll-like receptor family.
    
 0.932
irak4
Interleukin-1 receptor-associated kinase 4.
   
 0.926
LOC113019278
Interferon regulatory factor 3.
    
 0.917
irf7
Interferon regulatory factor 7.
     
 0.912
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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