Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pacc1Proton activated chloride channel 1. (361 aa)    
Predicted Functional Partners:
LOC113030070
Cytochrome b5 domain containing 2; Belongs to the cytochrome b5 family.
      
 0.711
nenf
Neudesin neurotrophic factor; Belongs to the cytochrome b5 family.
      
 0.705
ENSACLP00000012446
MANSC domain-containing protein.
      
 0.663
LOC113013036
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
      
 0.655
tmem275
Transmembrane protein 275.
      
 0.655
retreg3
Reticulophagy regulator family member 3.
      
 0.647
LOC113012223
Uncharacterized protein.
      
 0.646
jade3
Jade family PHD finger 3.
      
 0.646
LOC113033650
Glycerol-3-phosphate acyltransferase 2, mitochondrial.
    
 
 0.614
ENSACLP00000028937
A kinase (PRKA) anchor protein 17A.
      
 0.612
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (20%) [HD]