Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113026513Ig-like domain-containing protein. (702 aa)    
Predicted Functional Partners:
LOC113022754
Tankyrase_bdg_C domain-containing protein.
    
  0.714
LOC113008657
Bone morphogenetic protein/retinoic acid inducible neural-specific 3a, tandem duplicate 1.
   
  
 0.668
stoml1
Stomatin (EPB72)-like 1.
  
 
 0.634
LOC113024562
Vasorin a.
   
 
 0.625
vasn
Vasorin b.
   
 
 0.625
lrrc40
Leucine rich repeat containing 40.
    
   0.588
sae1
SUMO1 activating enzyme subunit 1.
    
 0.573
LOC113010089
Vav 3 guanine nucleotide exchange factor b.
    
  0.572
ntng1
Netrin g1a.
    
  0.572
eef1g
Eukaryotic translation elongation factor 1 gamma.
    
 0.548
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.