STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atf1Activating transcription factor 1. (311 aa)    
Predicted Functional Partners:
ENSACLP00000036881
CREB binding protein a.
   
 0.879
LOC113020749
CREB binding protein b.
   
 0.879
creb3l1
BZIP domain-containing protein.
    
0.862
LOC113021131
E1A binding protein p300 b.
    
 0.838
LOC113027597
E1A binding protein p300 a.
    
 0.838
LOC113034078
cAMP responsive element binding protein 3-like 3 like.
    
0.827
creb3l2
cAMP responsive element binding protein 3-like 2.
    
 0.827
creb3l4
BZIP domain-containing protein.
    
 0.827
LOC113016930
cAMP responsive element binding protein 3-like 3a.
    
 0.827
ENSACLP00000011763
TORC_N domain-containing protein.
    
 0.813
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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