STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113008204Uncharacterized protein. (1645 aa)    
Predicted Functional Partners:
ENSACLP00000017910
FLII actin remodeling protein.
    
 
 0.910
ENSACLP00000023092
Protein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family.
   
 
 0.645
capzb
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
   
 
 0.638
tmod1
Tropomodulin 1.
    
 
 0.632
tmod4
Tropomodulin 4 (muscle).
    
 
 0.632
LOC113020065
Tropomodulin 2.
    
   0.613
ift74
Intraflagellar transport 74.
    
   0.606
LOC113007917
Actin related protein 3; Belongs to the actin family.
   
   0.597
LOC113016588
Uncharacterized protein; Belongs to the actin family.
   
   0.597
ENSACLP00000025627
Actin related protein 3B; Belongs to the actin family.
   
   0.597
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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