STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113013062Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2. (350 aa)    
Predicted Functional Partners:
pde6g
Phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b.
   
 0.990
LOC113014465
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
 0.967
LOC113022254
Rhodopsin.
   
 0.966
ENSACLP00000016208
Rhodopsin.
   
 0.966
LOC113022256
Rhodopsin.
   
 0.966
LOC113022298
Guanine nucleotide binding protein (G protein), beta polypeptide 1b.
   
 0.964
LOC113013015
Guanine nucleotide binding protein (G protein), beta polypeptide 1a.
   
 0.964
pde6a
Phosphodiesterase.
   
 0.955
LOC113021489
Regulator of G protein signaling 9a.
   
 0.952
rgs11
Regulator of G protein signaling 11.
   
 0.952
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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