STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113032189Si:ch211-231m23.4. (348 aa)    
Predicted Functional Partners:
LOC113022538
Uncharacterized protein.
     
 0.827
npy
Neuropeptide Y.
     
 0.809
LOC113022754
Tankyrase_bdg_C domain-containing protein.
    
  0.650
ENSACLP00000008297
DUF4062 domain-containing protein.
    
  0.546
LOC113013062
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
    
 0.532
LOC113022290
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
    
 0.532
LOC113013061
Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.
    
  0.518
LOC113023276
Guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b.
    
  0.518
gnai2
Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2b.
    
  0.518
ENSACLP00000020083
Uncharacterized protein.
    
  0.518
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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