STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113015064Homeobox domain-containing protein. (378 aa)    
Predicted Functional Partners:
LOC113015103
Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.
   
 
 0.872
HOXA7
Homeobox A7.
   
 
 0.705
ipo8
Importin 8.
    
   0.605
ENSACLP00000038789
Importin N-terminal domain-containing protein.
    
   0.605
ipo7
Importin 7.
    
   0.605
hoxd10
Homeobox D10a.
   
 
 0.493
LOC113013761
Homeobox C10a.
   
 
 0.476
pgr
Progesterone receptor.
    
 
 0.457
meis2
Meis homeobox 2a.
    
 
 0.433
LOC113006792
Meis homeobox 2b.
    
 
 0.433
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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