STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113022573Methyltransf_11 domain-containing protein. (244 aa)    
Predicted Functional Partners:
ENSACLP00000028496
Uncharacterized protein.
    
   0.728
ENSACLP00000028563
Pumilio RNA-binding family member 1.
    
   0.728
pum2
Pumilio RNA-binding family member 2.
    
   0.728
mettl25
Methyltransferase like 25.
      
 0.655
eef1akmt2
EEF1A lysine methyltransferase 2; Protein-lysine methyltransferase that selectively catalyzes the trimethylation of EEF1A at 'Lys-318'; Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM4 family.
      
 0.651
fdft1
Farnesyl-diphosphate farnesyltransferase 1.
    
 0.644
trmt112
tRNA methyltransferase subunit 11-2.
   
 0.577
ddx55
RNA helicase.
   
 0.555
ubiad1
UbiA prenyltransferase domain containing 1.
    
 0.530
LOC113019986
Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family.
   
  
 0.527
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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