ENSACLP00000001830 protein (Astatotilapia calliptera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSACLP00000001830

ArfGAP with dual PH domains 2. (374 aa)

Predicted Functional Partners:

arfgap1

0.752

kif13a

0.646

LOC113007118

0.646

ENSACLP00000029561

0.646

ENSACLP00000014482

0.631

appl2

0.631

arfgap2

0.583

arfgap3

0.583

ENSACLP00000022676

0.565

ENSACLP00000022875

0.565

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000001830	ENSACLP00000014482	ENSACLP00000001830	ENSACLP00000014482	ArfGAP with dual PH domains 2.	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.	0.631
ENSACLP00000001830	ENSACLP00000022676	ENSACLP00000001830	ENSACLP00000022676	ArfGAP with dual PH domains 2.	Uncharacterized protein.	0.565
ENSACLP00000001830	ENSACLP00000022875	ENSACLP00000001830	ENSACLP00000022875	ArfGAP with dual PH domains 2.	ArfGAP with SH3 domain, ankyrin repeat and PH domain 3.	0.565
ENSACLP00000001830	ENSACLP00000029561	ENSACLP00000001830	ENSACLP00000029561	ArfGAP with dual PH domains 2.	Kinesin family member 13Ba; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.646
ENSACLP00000001830	LOC113007118	ENSACLP00000001830	ENSACLP00000013173	ArfGAP with dual PH domains 2.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.646
ENSACLP00000001830	appl2	ENSACLP00000001830	ENSACLP00000039998	ArfGAP with dual PH domains 2.	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.	0.631
ENSACLP00000001830	arfgap1	ENSACLP00000001830	ENSACLP00000007557	ArfGAP with dual PH domains 2.	ADP-ribosylation factor GTPase activating protein 1.	0.752
ENSACLP00000001830	arfgap2	ENSACLP00000001830	ENSACLP00000003268	ArfGAP with dual PH domains 2.	ADP-ribosylation factor GTPase activating protein 2.	0.583
ENSACLP00000001830	arfgap3	ENSACLP00000001830	ENSACLP00000032179	ArfGAP with dual PH domains 2.	ADP-ribosylation factor GTPase activating protein 3.	0.583
ENSACLP00000001830	kif13a	ENSACLP00000001830	ENSACLP00000006512	ArfGAP with dual PH domains 2.	Kinesin family member 13A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.646
ENSACLP00000014482	ENSACLP00000001830	ENSACLP00000014482	ENSACLP00000001830	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.	ArfGAP with dual PH domains 2.	0.631
ENSACLP00000014482	ENSACLP00000022676	ENSACLP00000014482	ENSACLP00000022676	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.	Uncharacterized protein.	0.761
ENSACLP00000014482	ENSACLP00000022875	ENSACLP00000014482	ENSACLP00000022875	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.	ArfGAP with SH3 domain, ankyrin repeat and PH domain 3.	0.761
ENSACLP00000014482	appl2	ENSACLP00000014482	ENSACLP00000039998	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.	0.996
ENSACLP00000014482	arfgap1	ENSACLP00000014482	ENSACLP00000007557	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.	ADP-ribosylation factor GTPase activating protein 1.	0.624
ENSACLP00000014482	arfgap2	ENSACLP00000014482	ENSACLP00000003268	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.	ADP-ribosylation factor GTPase activating protein 2.	0.571
ENSACLP00000014482	arfgap3	ENSACLP00000014482	ENSACLP00000032179	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.	ADP-ribosylation factor GTPase activating protein 3.	0.571
ENSACLP00000022676	ENSACLP00000001830	ENSACLP00000022676	ENSACLP00000001830	Uncharacterized protein.	ArfGAP with dual PH domains 2.	0.565
ENSACLP00000022676	ENSACLP00000014482	ENSACLP00000022676	ENSACLP00000014482	Uncharacterized protein.	Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.	0.761
ENSACLP00000022676	ENSACLP00000022875	ENSACLP00000022676	ENSACLP00000022875	Uncharacterized protein.	ArfGAP with SH3 domain, ankyrin repeat and PH domain 3.	0.598