Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113015292Homeobox A11a. (297 aa)    
Predicted Functional Partners:
LOC113013761
Homeobox C10a.
   
  
 0.527
hand2
Heart and neural crest derivatives expressed 2.
    
 
 0.508
hoxd10
Homeobox D10a.
   
  
 0.494
sall1
Spalt-like transcription factor 1a.
    
 
 0.475
sall3
Spalt-like transcription factor 3a.
    
 
 0.475
hoxc4
Homeobox C4a.
   
 
 0.439
hoxc9
Homeobox protein; Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Belongs to the Abd-B homeobox family.
   
 
 0.432
LOC113029118
TGFB-induced factor homeobox 1.
    
 
 0.413
LOC113034827
Meis homeobox 1 b.
    
 
 0.406
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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