STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dennd2dDENN/MADD domain containing 2Da. (577 aa)    
Predicted Functional Partners:
ENSACLP00000001129
RAB35, member RAS oncogene family b.
    
 0.809
ift27
Intraflagellar transport 27.
    
 0.809
LOC113020194
Si:dkey-16l2.16.
    
 0.809
suox
Sulfite oxidase.
      
 0.534
LOC113029983
Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.
   
 
  0.504
ENSACLP00000003376
Uncharacterized protein.
   
 
  0.504
ENSACLP00000007102
RAB9B, member RAS oncogene family.
     
 0.494
RAB9A
RAB9A, member RAS oncogene family.
     
 0.438
ENSACLP00000012866
Uncharacterized protein.
    
 
 0.400
ENSACLP00000012873
SH3 domain-containing protein.
    
 
 0.400
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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