Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000001865MCF.2 cell line derived transforming sequence-like 2. (1074 aa)    
Predicted Functional Partners:
LOC113022989
Cell division cycle 42.
    
 0.896
arhgef37
Rho guanine nucleotide exchange factor (GEF) 37.
     
 0.753
LOC113015068
Cell division cycle 42, like.
    
 0.674
ENSACLP00000023060
Cell division cycle 42, like.
    
 0.674
LOC113015067
Cell division cycle 42, like.
    
 0.674
LOC113015070
Uncharacterized protein.
    
 0.674
LOC113031477
Uncharacterized protein.
    
 0.674
LOC113012818
Uncharacterized protein.
    
 0.618
LOC113012962
Uncharacterized protein.
    
 0.618
ENSACLP00000012848
Uncharacterized protein.
    
 0.618
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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