STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113033514Tetraspanin. (257 aa)    
Predicted Functional Partners:
tspan18
Tetraspanin.
     
 0.668
ENSACLP00000033079
PR domain containing 11.
     
 0.661
LOC113027647
Tetraspanin.
    
 0.639
LOC113026668
Tetraspanin.
    
 0.639
met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.619
LOC113022284
Macrophage stimulating 1 receptor a.
    
 0.617
mst1r
Macrophage stimulating 1 receptor b.
    
 0.617
amfr
Autocrine motility factor receptor b.
    
 
 0.602
ENSACLP00000032458
Synovial apoptosis inhibitor 1, synoviolin.
    
 
 0.602
LOC113027041
Zgc:123278.
    
 
 0.510
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.