Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CLEC3AC-type lectin domain family 3 member A. (203 aa)    
Predicted Functional Partners:
trip4
Thyroid hormone receptor interactor 4.
    
   0.818
rnaseh1
Ribonuclease H1; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
    
   0.785
znrf1
Zinc and ring finger 1.
      
 0.696
cish
Uncharacterized protein.
      
 0.654
vat1l
Vesicle amine transport 1-like.
    
 
 0.648
syf2
SYF2 pre-mRNA-splicing factor.
      
 0.614
LOC113007980
Chemokine (C-X-C motif) receptor 1; Belongs to the G-protein coupled receptor 1 family.
      
 0.613
ENSACLP00000039045
WW domain containing oxidoreductase.
    
 
 0.611
LOC113026917
Nuclear factor of activated T cells 5a.
      
 0.610
psmd7
Proteasome 26S subunit, non-ATPase 7.
      
 0.610
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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