STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dusp12Dual specificity phosphatase 12. (299 aa)    
Predicted Functional Partners:
ENSACLP00000006047
Mitogen-activated protein kinase.
   
 0.680
LOC113034495
Mitogen-activated protein kinase.
   
 0.680
ENSACLP00000026173
Mitogen-activated protein kinase.
   
 0.680
polm
DNA-directed DNA/RNA polymerase mu; Gap-filling polymerase involved in repair of DNA double- strand breaks by non-homologous end joining (NHEJ). Belongs to the DNA polymerase type-X family.
  
    0.677
ENSACLP00000026569
DNA nucleotidylexotransferase; Template-independent DNA polymerase which catalyzes the random addition of deoxynucleoside 5'-triphosphate to the 3'-end of a DNA initiator.
  
    0.677
LOC113036079
Mitogen-activated protein kinase.
   
 0.648
ptprr
Protein tyrosine phosphatase receptor type R.
   
 0.612
ptpn7
Uncharacterized protein.
   
 0.612
espl1
Extra spindle pole bodies like 1, separase.
    
 0.610
LOC113022066
Membrane associated guanylate kinase, WW and PDZ domain containing 3b.
    
  0.608
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.