LOC113032490 protein (Astatotilapia calliptera)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

LOC113032490

Uncharacterized protein. (356 aa)

Predicted Functional Partners:

LOC113031860

0.973

nfyc

0.909

ENSACLP00000030483

0.689

LOC113021565

0.675

ENSACLP00000041064

0.672

cetp

0.668

apof

0.601

chrac1

0.597

LOC113032020

0.523

LOC113032148

0.523

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000030483	ENSACLP00000041064	ENSACLP00000030483	ENSACLP00000041064	Lecithin-cholesterol acyltransferase.	Apolipoprotein Eb.	0.600
ENSACLP00000030483	LOC113032020	ENSACLP00000030483	ENSACLP00000041061	Lecithin-cholesterol acyltransferase.	Uncharacterized protein.	0.995
ENSACLP00000030483	LOC113032148	ENSACLP00000030483	ENSACLP00000041063	Lecithin-cholesterol acyltransferase.	Uncharacterized protein.	0.995
ENSACLP00000030483	LOC113032490	ENSACLP00000030483	ENSACLP00000001883	Lecithin-cholesterol acyltransferase.	Uncharacterized protein.	0.689
ENSACLP00000030483	cetp	ENSACLP00000030483	ENSACLP00000035925	Lecithin-cholesterol acyltransferase.	Cholesteryl ester transfer protein; Involved in the transfer of neutral lipids, including cholesteryl ester and triglyceride, among lipoprotein particles. Allows the net movement of cholesteryl ester from high density lipoproteins/HDL to triglyceride-rich very low density lipoproteins/VLDL, and the equimolar transport of triglyceride from VLDL to HDL; Belongs to the BPI/LBP/Plunc superfamily. BPI/LBP family.	0.782
ENSACLP00000041064	ENSACLP00000030483	ENSACLP00000041064	ENSACLP00000030483	Apolipoprotein Eb.	Lecithin-cholesterol acyltransferase.	0.600
ENSACLP00000041064	LOC113021565	ENSACLP00000041064	ENSACLP00000037460	Apolipoprotein Eb.	Microseminoprotein, beta-like.	0.516
ENSACLP00000041064	LOC113032020	ENSACLP00000041064	ENSACLP00000041061	Apolipoprotein Eb.	Uncharacterized protein.	0.990
ENSACLP00000041064	LOC113032148	ENSACLP00000041064	ENSACLP00000041063	Apolipoprotein Eb.	Uncharacterized protein.	0.990
ENSACLP00000041064	LOC113032490	ENSACLP00000041064	ENSACLP00000001883	Apolipoprotein Eb.	Uncharacterized protein.	0.672
ENSACLP00000041064	cetp	ENSACLP00000041064	ENSACLP00000035925	Apolipoprotein Eb.	Cholesteryl ester transfer protein; Involved in the transfer of neutral lipids, including cholesteryl ester and triglyceride, among lipoprotein particles. Allows the net movement of cholesteryl ester from high density lipoproteins/HDL to triglyceride-rich very low density lipoproteins/VLDL, and the equimolar transport of triglyceride from VLDL to HDL; Belongs to the BPI/LBP/Plunc superfamily. BPI/LBP family.	0.874
LOC113021565	ENSACLP00000041064	ENSACLP00000037460	ENSACLP00000041064	Microseminoprotein, beta-like.	Apolipoprotein Eb.	0.516
LOC113021565	LOC113032020	ENSACLP00000037460	ENSACLP00000041061	Microseminoprotein, beta-like.	Uncharacterized protein.	0.875
LOC113021565	LOC113032148	ENSACLP00000037460	ENSACLP00000041063	Microseminoprotein, beta-like.	Uncharacterized protein.	0.875
LOC113021565	LOC113032490	ENSACLP00000037460	ENSACLP00000001883	Microseminoprotein, beta-like.	Uncharacterized protein.	0.675
LOC113031860	LOC113032490	ENSACLP00000001841	ENSACLP00000001883	Paraoxonase 2.	Uncharacterized protein.	0.973
LOC113031860	apof	ENSACLP00000001841	ENSACLP00000037506	Paraoxonase 2.	Apolipoprotein F.	0.498
LOC113031860	chrac1	ENSACLP00000001841	ENSACLP00000024054	Paraoxonase 2.	Chromatin accessibility complex subunit 1.	0.584
LOC113031860	nfyc	ENSACLP00000001841	ENSACLP00000027205	Paraoxonase 2.	Nuclear transcription factor Y, gamma.	0.898
LOC113032020	ENSACLP00000030483	ENSACLP00000041061	ENSACLP00000030483	Uncharacterized protein.	Lecithin-cholesterol acyltransferase.	0.995