LOC113022067 protein (Astatotilapia calliptera)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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Co-expression

Experiments

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[Homology]

Score

LOC113022067

Uncharacterized protein. (362 aa)

Predicted Functional Partners:

ENSACLP00000005172

0.869

LOC113021544

0.869

ENSACLP00000031985

0.869

ENSACLP00000032008

0.869

LOC113023872

0.869

LOC113031953

0.826

ENSACLP00000003027

0.826

ENSACLP00000016006

0.826

LOC113023847

0.826

ENSACLP00000033058

0.826

Your Current Organism:

Astatotilapia calliptera

NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSACLP00000003027	LOC113022067	ENSACLP00000003027	ENSACLP00000001897	Complement 4B (Chido blood group).	Uncharacterized protein.	0.826
ENSACLP00000005172	LOC113022067	ENSACLP00000005172	ENSACLP00000001897	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein.	0.869
ENSACLP00000016006	ENSACLP00000033058	ENSACLP00000016006	ENSACLP00000033058	Complement component c3b, tandem duplicate 2.	Uncharacterized protein.	0.645
ENSACLP00000016006	LOC113022067	ENSACLP00000016006	ENSACLP00000001897	Complement component c3b, tandem duplicate 2.	Uncharacterized protein.	0.826
ENSACLP00000016006	LOC113023847	ENSACLP00000016006	ENSACLP00000032864	Complement component c3b, tandem duplicate 2.	Uncharacterized protein.	0.645
ENSACLP00000031985	LOC113022067	ENSACLP00000031985	ENSACLP00000001897	Si:ch211-241f5.3; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein.	0.869
ENSACLP00000032008	LOC113022067	ENSACLP00000032008	ENSACLP00000001897	Si:ch211-241f5.3; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein.	0.869
ENSACLP00000033058	ENSACLP00000016006	ENSACLP00000033058	ENSACLP00000016006	Uncharacterized protein.	Complement component c3b, tandem duplicate 2.	0.645
ENSACLP00000033058	LOC113022067	ENSACLP00000033058	ENSACLP00000001897	Uncharacterized protein.	Uncharacterized protein.	0.826
LOC113021544	LOC113022067	ENSACLP00000005190	ENSACLP00000001897	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	Uncharacterized protein.	0.869
LOC113022067	ENSACLP00000003027	ENSACLP00000001897	ENSACLP00000003027	Uncharacterized protein.	Complement 4B (Chido blood group).	0.826
LOC113022067	ENSACLP00000005172	ENSACLP00000001897	ENSACLP00000005172	Uncharacterized protein.	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	0.869
LOC113022067	ENSACLP00000016006	ENSACLP00000001897	ENSACLP00000016006	Uncharacterized protein.	Complement component c3b, tandem duplicate 2.	0.826
LOC113022067	ENSACLP00000031985	ENSACLP00000001897	ENSACLP00000031985	Uncharacterized protein.	Si:ch211-241f5.3; Belongs to the G-protein coupled receptor 2 family.	0.869
LOC113022067	ENSACLP00000032008	ENSACLP00000001897	ENSACLP00000032008	Uncharacterized protein.	Si:ch211-241f5.3; Belongs to the G-protein coupled receptor 2 family.	0.869
LOC113022067	ENSACLP00000033058	ENSACLP00000001897	ENSACLP00000033058	Uncharacterized protein.	Uncharacterized protein.	0.826
LOC113022067	LOC113021544	ENSACLP00000001897	ENSACLP00000005190	Uncharacterized protein.	Uncharacterized protein; Belongs to the G-protein coupled receptor 2 family.	0.869
LOC113022067	LOC113023847	ENSACLP00000001897	ENSACLP00000032864	Uncharacterized protein.	Uncharacterized protein.	0.826
LOC113022067	LOC113023872	ENSACLP00000001897	ENSACLP00000036204	Uncharacterized protein.	Adhesion G protein-coupled receptor E5b, duplicate 3; Belongs to the G-protein coupled receptor 2 family.	0.869
LOC113022067	LOC113031953	ENSACLP00000001897	ENSACLP00000002861	Uncharacterized protein.	Complement 4B (Chido blood group).	0.826