STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113008398Chloride intracellular channel protein; Belongs to the chloride channel CLIC family. (244 aa)    
Predicted Functional Partners:
gsr
Glutathione reductase.
     
 0.694
gsto1
Glutathione S-transferase omega 2; Belongs to the GST superfamily.
     
 0.672
ggnbp2
Gametogenetin binding protein 2.
     
 0.617
vars1
Valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.604
aifm3
Apoptosis inducing factor mitochondria associated 3.
     
 0.555
aifm2
Apoptosis inducing factor mitochondria associated 2.
     
 0.555
LOC113031263
Apoptosis inducing factor mitochondria associated 5.
     
 0.555
ENSACLP00000030711
Apoptosis inducing factor mitochondria associated 4.
     
 0.555
dld
Dihydrolipoyl dehydrogenase.
     
 0.533
txnrd2
Thioredoxin reductase 2, tandem duplicate 1.
     
 0.533
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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