STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nrip1Nuclear receptor interacting protein 1b. (1199 aa)    
Predicted Functional Partners:
esr2
Estrogen receptor 2b.
    
 0.884
ENSACLP00000028417
Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues.
    
 0.884
LOC113037293
Estrogen receptor 2a.
    
 0.884
ENSACLP00000007236
Uncharacterized protein.
    
 0.869
rora
RAR-related orphan receptor A, paralog a.
    
 0.869
ppargc1a
Peroxisome proliferator-activated receptor gamma, coactivator 1 alpha.
    
 0.837
ENSACLP00000017198
Estrogen-related receptor gamma a.
    
 0.811
LOC113037632
Uncharacterized protein.
    
 0.811
ESRRB
Estrogen-related receptor beta.
    
 0.811
LOC113030159
Estrogen-related receptor alpha.
    
 0.807
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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