STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000001914G protein-coupled receptor 61. (471 aa)    
Predicted Functional Partners:
LOC113022754
Tankyrase_bdg_C domain-containing protein.
    
  0.606
ENSACLP00000018554
HAUS augmin-like complex, subunit 3.
    
 0.460
ENSACLP00000031169
Neurotensin.
    
  0.443
ENSACLP00000003169
HAUS augmin-like complex, subunit 1.
    
 0.440
LOC113024257
Prepronociceptin a.
    
  0.437
haus8
Uncharacterized protein.
    
  0.431
LOC113015545
Uncharacterized protein.
    
 0.430
POMC
Proopiomelanocortin.
    
 0.430
rbm42
RNA binding motif protein 42.
    
  0.407
edn1
Endothelin 1.
    
  0.406
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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