Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
csrp3Cysteine and glycine-rich protein 3 (cardiac LIM protein). (193 aa)    
Predicted Functional Partners:
LOC113018648
Myozenin 2a.
   
  
 0.927
LOC113024245
Myozenin 2b.
   
  
 0.927
tnnc1
Troponin C type 1b (slow).
   
 
 0.866
LOC113012963
Cysteine and glycine-rich protein 1a.
     
  0.857
LOC113009469
Cysteine and glycine-rich protein 2.
     
  0.857
LOC113022037
Cysteine and glycine-rich protein 1b.
     
  0.857
ENSACLP00000021289
LIM zinc-binding domain-containing protein.
   
 
 0.846
ENSACLP00000017444
Xin actin binding repeat containing 2b.
   
  
 0.838
ENSACLP00000027435
Xin actin binding repeat containing 1.
   
  
 0.838
LOC113015691
Xin actin binding repeat containing 2a.
   
  
 0.838
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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