STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113032489Potassium channel, subfamily K, member 5b; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. (444 aa)    
Predicted Functional Partners:
KCNJ15
Potassium voltage-gated channel subfamily J member 15.
     
 0.763
kcnk18
Potassium channel, subfamily K, member 18; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
     
 0.729
KCNK16
Potassium two pore domain channel subfamily K member 16; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
     
 0.670
kcnh8
Potassium voltage-gated channel, subfamily H (eag-related), member 8.
    
 
 0.628
KCNJ10
Potassium voltage-gated channel subfamily J member 10.
     
 0.617
LOC113018947
Uncharacterized protein.
     
 0.617
fkbp14
Peptidylprolyl isomerase.
      
 0.603
smg8
SMG8 nonsense mediated mRNA decay factor.
      
 0.600
kcnk1
Potassium channel subfamily K member.
     
 0.599
LOC113011780
Potassium channel subfamily K member.
   
 
 0.566
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.