STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
psme4Proteasome activator subunit 4a. (1847 aa)    
Predicted Functional Partners:
ENSACLP00000035637
UBX domain-containing protein 7.
   
 
  0.982
psma3
Proteasome subunit alpha type.
    
 0.972
psma2
Proteasome subunit alpha type.
    
 0.972
ENSACLP00000007531
Proteasome subunit beta.
    
 0.965
ENSACLP00000014651
Proteasome subunit beta; Belongs to the peptidase T1B family.
    
 0.964
psma8
Proteasome subunit alpha type.
    
 0.964
psma1
Proteasome subunit alpha type.
    
 0.962
LOC113010979
Proteasome subunit beta.
    
 0.961
psma4
Proteasome subunit alpha type.
    
 0.959
ENSACLP00000013657
Proteasome subunit beta.
    
 0.956
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.