STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cd34Si:ch211-286o17.1. (341 aa)    
Predicted Functional Partners:
LOC113015921
Selectin P.
   
 
 0.847
ENSACLP00000037026
Uncharacterized protein.
   
 
 0.847
ENSACLP00000037114
Uncharacterized protein.
   
 
 0.847
ENSACLP00000037295
Uncharacterized protein.
   
 
 0.847
ENSACLP00000037142
Uncharacterized protein.
  
   
 0.631
ENSACLP00000030532
Kit ligand a.
  
   
 0.615
cdh5
Cadherin 5; Cadherins are calcium-dependent cell adhesion proteins.
   
  
 0.562
ENSACLP00000018204
Protein tyrosine phosphatase receptor type C.
      
 0.536
fah
Fumarylacetoacetase.
      
 0.534
cd79a
CD79a molecule, immunoglobulin-associated alpha.
      
 0.533
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
Server load: low (28%) [HD]