STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113014930Nuclear factor of activated T cells 1. (917 aa)    
Predicted Functional Partners:
ENSACLP00000003860
Protein phosphatase 3 (formerly 2B), regulatory s1ubunit B, alpha isoform, b.
    
 0.970
ppp3r1
Uncharacterized protein.
    
 0.970
ppp3ca
Serine/threonine-protein phosphatase.
    
 0.943
LOC113036079
Mitogen-activated protein kinase.
    
 0.938
ENSACLP00000006047
Mitogen-activated protein kinase.
    
 0.937
LOC113033345
Serine/threonine-protein phosphatase.
    
 0.936
LOC113026190
Serine/threonine-protein phosphatase.
    
 0.936
LOC113033416
Serine/threonine-protein phosphatase.
    
 0.936
LOC113030393
Serine/threonine-protein phosphatase.
    
 0.935
LOC113034495
Mitogen-activated protein kinase.
    
 0.928
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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