Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
exd13'-5' exonuclease domain-containing protein. (531 aa)    
Predicted Functional Partners:
bicd1
Bicaudal D homolog 1a.
    
 
 0.915
bicd2
Bicaudal D homolog 2 (Drosophila).
    
 
 0.915
ENSACLP00000032188
Uncharacterized protein.
    
 
 0.915
DYNLL2
Dynein light chain.
    
 
 0.885
LOC113034155
Dynein light chain.
    
 
 0.885
LOC113030325
Dynein light chain.
    
 
 0.885
dnal4
Dynein light chain.
    
 
 0.849
LOC113021324
Homeobox B7a.
    
   0.783
nxt2
Nuclear transport factor 2-like export factor 2.
    
   0.764
LOC113034010
Docking protein 2.
    
   0.748
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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