Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GPANK1G-patch domain and ankyrin repeats 1. (342 aa)    
Predicted Functional Partners:
ENSACLP00000027418
Uncharacterized protein.
      
 0.663
ENSACLP00000002722
Family with sequence similarity 32 member A.
      
 0.655
LOC113026542
Golgi transport 1Bb.
      
 0.652
GOLT1B
Golgi transport 1Ba.
      
 0.652
ENSACLP00000017066
Zgc:103697.
      
 0.614
sde2
SDE2 telomere maintenance homolog (S. pombe).
      
 0.613
ENSACLP00000013451
Family with sequence similarity 50 member A.
      
 0.612
apom
Uncharacterized protein.
      
 0.612
FAM110A
Family with sequence similarity 110 member A.
      
 0.581
abt1
Activator of basal transcription 1.
   
  
 0.570
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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