STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000001983Kringle domain-containing protein. (81 aa)    
Predicted Functional Partners:
ENSACLP00000023484
Fibrinogen alpha chain.
   
 0.939
fgb
Fibrinogen beta chain.
   
 0.933
serpinc1
Serpin peptidase inhibitor, clade C (antithrombin), member 1; Belongs to the serpin family.
  
 0.911
serpind1
Serpin peptidase inhibitor, clade D (heparin cofactor), member 1; Belongs to the serpin family.
  
 0.900
fgg
Fibrinogen gamma chain.
   
 0.897
hgfac
HGF activator.
   
 0.886
LOC113025889
Alpha-1-microglobulin/bikunin precursor.
   
  0.876
serpinf2
SERPIN domain-containing protein; Belongs to the serpin family.
  
 0.862
LOC113030123
SERPIN domain-containing protein; Belongs to the serpin family.
  
 0.862
LOC113015525
Uncharacterized protein; Belongs to the peptidase S1 family.
   
  
 0.851
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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