Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
evx1Even-skipped homeobox 1. (375 aa)    
Predicted Functional Partners:
ENSACLP00000025345
Inter-alpha-trypsin inhibitor heavy chain family member 6.
    
   0.531
LOC113022398
Arginine-glutamic acid dipeptide (RE) repeats b.
    
 
 0.504
ENSACLP00000036434
Atrophin 1.
    
 
 0.504
ENSACLP00000038880
Arginine-glutamic acid dipeptide (RE) repeats a.
    
 
 0.504
unc5a
Unc-5 netrin receptor A.
    
 
 0.501
mfsd5
Major facilitator superfamily domain containing 5.
      
 0.466
shh
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
      
 0.432
LOC113033469
Unc-5 netrin receptor Db.
    
 
 0.431
ENSACLP00000039929
Unc-5 netrin receptor Da.
    
 
 0.431
emx2
Empty spiracles homeobox 2.
  
   
 0.428
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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