STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000002020E2F transcription factor 8. (867 aa)    
Predicted Functional Partners:
tfdp1
Transcription factor.
    
 
 0.726
e2f7
E2F transcription factor 7.
  
  
0.684
e2f1
E2F transcription factor 1.
   
0.591
bub1b
BUB1 mitotic checkpoint serine/threonine kinase Bb.
   
  
 0.571
ENSACLP00000002644
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.570
rb1
Retinoblastoma 1.
    
 
 0.553
ENSACLP00000025268
Retinoblastoma-like 1 (p107).
   
 
 0.553
LOC113025000
Retinoblastoma-like 2 (p130).
   
 
 0.553
ttk
Ttk protein kinase.
   
  
 0.552
cdc6
Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family.
   
  
 0.518
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.