Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ENSACLP00000002027Phosphatase, orphan 1. (275 aa)    
Predicted Functional Partners:
LOC113023789
Phosphate cytidylyltransferase 2, ethanolamine.
     
 0.899
PCYT2
Phosphate cytidylyltransferase 2, ethanolamine.
     
 0.899
chka
Choline kinase alpha.
     
 0.882
ENSACLP00000038769
Choline kinase beta.
     
 0.882
pcyt1a
Phosphate cytidylyltransferase 1, choline, alpha a.
     
 0.878
LOC113031185
Phosphate cytidylyltransferase 1, choline, beta b.
     
 0.878
pcyt1b
Phosphate cytidylyltransferase 1, choline, beta a.
     
 0.878
gpcpd1
Glycerophosphocholine phosphodiesterase 1.
   
 
 0.878
LOC113006809
Phosphoethanolamine methyltransferase.
     
 0.877
LOC113028305
Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family.
     
 0.875
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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