Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gpsm2Uncharacterized protein. (663 aa)    
Predicted Functional Partners:
LOC113013061
Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.
   
 0.906
INSC
INSC spindle orientation adaptor protein.
    
 
 0.878
ENSACLP00000035769
Uncharacterized protein.
    
 
 0.866
LOC113023276
Guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b.
   
 0.853
gnai2
Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2b.
   
 0.853
ENSACLP00000020083
Uncharacterized protein.
   
 0.853
LOC113008934
Uncharacterized protein.
   
 0.853
LOC113023790
Guanine nucleotide binding protein (G protein) alpha v1.
   
 0.853
ENSACLP00000035792
Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2a.
   
 0.853
ENSACLP00000038134
Uncharacterized protein.
   
 0.853
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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