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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpsm2Uncharacterized protein. (663 aa)    
Predicted Functional Partners:
ENSACLP00000035769
Uncharacterized protein.
    
 
 0.962
INSC
INSC spindle orientation adaptor protein.
    
 
 0.955
ENSACLP00000026819
PDZ domain-containing protein.
    
 
 0.891
whrn
Whirlin a.
    
 
 0.891
LOC113013061
Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3.
   
 0.855
LOC113013062
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
   
 0.853
LOC113022290
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
   
 0.853
LOC113036547
FERM and PDZ domain containing 1b.
    
 
 0.831
LOC113023648
Uncharacterized protein.
    
 
 0.831
LOC113023276
Guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, b.
   
 0.824
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.