STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000002040Uncharacterized protein. (352 aa)    
Predicted Functional Partners:
fancm
Uncharacterized protein.
    
  0.857
h6pd
Hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase).
     
 0.595
lin9
Lin-9 DREAM MuvB core complex component.
    
 0.468
ENSACLP00000001792
Lin-52 DREAM MuvB core complex component.
    
 0.450
lin54
Lin-54 DREAM MuvB core complex component.
    
 0.446
ercc4
Excision repair cross-complementation group 4.
    
  0.437
ENSACLP00000011244
Mediator complex subunit 23.
    
  0.430
LOC113030708
WSC domain containing 1b.
    
  0.428
CENPS
Centromere protein S.
    
  0.428
kremen1
Kringle containing transmembrane protein 1.
    
  0.428
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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