Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC113015075Tax1 (human T-cell leukemia virus type I) binding protein 1a. (959 aa)    
Predicted Functional Partners:
ENSACLP00000015298
NBR1 autophagy cargo receptor b.
   
 0.982
LOC113028111
NBR1 autophagy cargo receptor a.
   
 0.982
sqstm1
Sequestosome 1.
    
 0.980
tnfaip3
Tumor necrosis factor, alpha-induced protein 3.
    
 0.973
ENSACLP00000009605
Ubiquitin B.
   
  0.970
LOC113030103
Uncharacterized protein.
   
  0.970
ENSACLP00000035197
SKICH domain-containing protein.
    
 0.964
ENSACLP00000003628
Microtubule-associated protein 1 light chain 3 gamma.
    
 0.959
gabarap
GABA(A) receptor-associated protein b.
    
 0.949
ENSACLP00000008630
GABA(A) receptor-associated protein like 2.
    
 0.948
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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