STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSACLP00000002049FERM domain-containing protein. (2284 aa)    
Predicted Functional Partners:
slc4a1
Anion exchange protein.
   
 
 0.737
CASK
Uncharacterized protein; Belongs to the MAGUK family.
   
 0.697
LOC113015779
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
 0.697
LOC113011686
Spectrin beta chain; Belongs to the spectrin family.
   
 0.634
mpp1
Membrane protein, palmitoylated 1; Belongs to the MAGUK family.
   
 0.621
eif3a
Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
    
   0.618
sptan1
Spectrin alpha, non-erythrocytic 1.
   
 0.588
LOC113022662
Fibromodulin a.
     
  0.551
TGFB3
Transforming growth factor beta; Belongs to the TGF-beta family.
     
  0.551
LOC113011971
Transforming growth factor beta; Belongs to the TGF-beta family.
     
  0.551
Your Current Organism:
Astatotilapia calliptera
NCBI taxonomy Id: 8154
Other names: A. calliptera, Ctenochromis callipterus, Haplochromis calliptera, Haplochromis callipterus, eastern happy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.